Function reference • remora

All functions
`TownsvilleReefQC`	Quality-controlled bull shark detections (5 individuals, subsampled for efficiency)
`choose_file()`	Choose a file interactively
`data_with_sst_and_current`	??
`det_per_receiver_location()`	Receiver location summary
`det_per_species()`	Detections per species
`det_per_station()`	Detections per station
`det_per_tag()`	Number of detections per transmitter
`det_per_tag_location()`	Number of detections per tag, tag deployment coordinates and datetime
`det_species_station()`	Detections per station per species
`extractBlue()`	Extract and append Bluelink Reanalysis (BRAN) environmental data to detection data
`extractEnv()`	Extract and append remote sensing environmental data to detection data
`extractMoor()`	Link the QC Detection Dataset to the Sensor Value obtained by the Nearest IMOS Mooring
`getDistance()`	Find closest mooring
`getOverlap()`	Extract number of tag detections that fall within the duration of sensor coverage at each mooring
`get_expert_distribution_shp_CAAB()`	match species CAAB code with CSIRO expert distribution shapefiles
`grabQC()`	grab subsets of the QC output
`imos_variables()`	Table of all available IMOS variables accessible from `remora` package
`imos_variables_table`	??
`mooringDownload()`	Download the IMOS Mooring Data for a Single Mooring Site
`mooringTable()`	Pull the Latest IMOS Moorings Dataset from the Server
`n_detections()`	Number of total detections per transmitter
`n_receivers()`	Number of total receivers
`n_species()`	Number of total species
`n_tags()`	Number of total transmitters
`plotDT()`	Depth-time plot
`plotQC()`	produce interactive leaflet maps showing the occurrence of QC'd detections per species
`remora-package` `remora`	remora
`runQC()`	run IMOS-ATF acoustic detections quality control process
`sei()`	Station Efficiency Index
`shinyReport()`	Render Shiny report
`writeQC()`	write a QCsummary.csv file and/or QC processed `.csv` files for each tag deployment

Reference

All functions